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… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases themselves can … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …

… For the first time in several years, the DOE Joint Genome Institute hosted … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, … & Evolution of Self-Catalytic Introns across Earth’s Microbiomes Sonia Vargas and mentors Tomas Tyml and Frederik …

… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Newly developed chemiluminescent biosensors shed light on how bacteria function and … which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this … Summary From digestive tracts to plant surfaces and soil, bacteria live in complex and varied conditions. A …

… A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, … and plant metabolism across diverse ecosystems — from Antarctic soils and Icelandic hydrothermal systems to coastal wetlands …

… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the … to learn more about the program's areas of focus, major initiatives and more.  … BA/MS in Biophysics, Moscow Engineering Physics Institute, Moscow, Russia PhD in Molecular …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … hardwoods on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look … away in wood, converting it into their own carbon-rich structures, as well as atmospheric carbon dioxide.  Summary …

… An article summarizing the field of viral metagenomics, authored by JGI … piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early … think of – animal intestines (including humans), grassland soils, even deep-sea hydrothermal vents – and …

… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy … datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for …

… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … enzymes discovered in extreme environments to engineered microbiomes that accelerate biomass processing. This year’s … Network (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …

… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …