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Triggering Morel Fruiting
… capability of morel mycelium to acquire carbon from lignocellulosic-abundant matters such as plant litter and to … assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the … by the morel mycelium and consumed later. The above-mentioned decomposition leads to sustained exportation of organic …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … to characterize gene regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… suggest that fungi are breaking down plant fibers, like cellulose and lignin. Bacteria, on the other hand, appear to … near the roots. But the deeper down and away from the roots one goes, the more bacteria show up. The data underscore … to integrate the expertise and capabilities of more than one DOE Office of Science National User Facility , with the …
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Charting Progress toward Professional Goals
… of California's  CalTeach initiative. During their time at the Joint Genome Institute, they interacted with … below. Video Transcript: Deanna Beatty : Well, hi everyone. My name is Deanna Beatty, and I'm a genomic data … science communication, like prepping for that. But the one thing I've learned so far with like, presenting to like, …
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A Community Resource for Secondary Metabolite Researchers
… With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. …
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Understanding Wildfire Recovery, Starting in Soil
… and Coniochaeata lignaria , and both DNA and RNA viruses. One trait that stood out in both bacteria and fungi … microbes that had not returned to the forest within this timeframe, namely, ectomycorrhizal fungi species that can … program, researchers leverage the capabilities of more than one DOE Office of Science National User Facilities in a …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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JGI Interns at UC Merced Earn CAMP Merit Awards
… partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two … technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate Research Symposium , held …   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said Jesús Cisneros, director …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , one of DOE’s highest honors! Tringe, a microbiologist, was …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … foundation for Phytozome v10) back in 2014.  Several components of that codebase are no longer supported, and there … We hope to add several of them soon, but don’t yet have a timeline for their restoration. They include Jalview (for …
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