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A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A … their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial …

… outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the … into several small pools before sequencing to recover rare microbes. The technique was applied to a recent Nature … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… refine and improve the process of finding novel Cas genes and CRISPR systems. The collaboration has resulted in … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR … Prize … Combining forces with UC Berkeley to seek elusive gene-editing proteins … Berkeley Lab coverage … NERSC & JGI …

Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial …

… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and …

… flow cytometry protocols for targeted recovery of specific microbes. …

University of Washington … Shen et al., Mitochondrial ATP generation is more proteome efficient than glycolysis., … characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase., Nature Communications , 2023 Zhao …

… of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both … and flowering plants). Its genome also contains hundreds of genes uniquely associated with carbon dioxide capture and … green algal genomes using Chlamy as a reference for functional annotation, including Chromochloris zofingiensis …

… to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic substances has led … (ERD.) It is dependent on the presence of the existing microbes in the groundwater and adjusting the environmental … (NCRR) (5P20RR016480-12) and the National Institute of General Medical Sciences (NIGMS) (8 P20 GM103451-12) from …

Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, … Wildfire-dependent changes in soil microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. Ye et al (2022) … atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi. Proc Natl …

… to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic … in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding … aimed to streamline a process they often took on: generating virus-host predictions via multiple routes, then …