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… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, …

… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and Sheree Yao. ] ] The JGI welcomed 14 … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …

… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … To create this reference sequence, the team relied on bacterial artificial chromosomes (BACs), vectors that can …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as … senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the things that I … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… For the first time in several years, the DOE Joint Genome Institute hosted … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … And we’ve been working on isolating and cultivating and sequencing extremophile protists from a hypersaline alkaline …

… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … Cone Pool in Mono County, California, scientists have used sequencing methods for the first time to comprehensively … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains … senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the things that I … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research …

… P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A recent study shows that when … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …

… In honor of the JGI's 25th anniversary in 2022, we have … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. … Genome Institute. Hear her memories of what it was like sequencing around the clock and see some of the physical …