Search

… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome …

… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known …

… ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …

… with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor …

… Survey of Setaria's natural diversity reveals seed dispersal in … viridis), a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 pathway, … be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the …

… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this enormous … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without …

… Researchers looked across many organisms to see that aminotransferase enzymes have evolved … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab. In addition to …

… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort …

… in the government lab. And I find this really valuable because in this time that I’ve been in my PhD program, I’ve been … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … I started this, uh, summer internship was working with big data, but something that I learned from this program was how …