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… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus … trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us lemons, kumquats, limes, pomelos, …

… and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a month now since …

… Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and R&D for production and user science. He …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and increase its …

… A special issue of Synthetic Biology celebrates research enabled by the JGI … One review article in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …

… and even how quickly. But there's a catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more …

… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data … science and projects through implementation of advanced analysis pipelines and tools as well as development and …

… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … in fungi. A team of researchers reported on the largest analysis of 5mC distribution across the fungal tree of life … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …

… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing … laboratory information tracking, and enables efficient analysis and reporting of sequencing projects and their … solutions for large-scale sequencing projects and data analysis pipelines.  …