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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
Learn more
Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. … can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … regulation is critical to ensuring genes vital for growth and survival across various environments are …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … crosses. The work wraps more than a decade of working with researchers at the U.S. Department of Energy (DOE) Joint …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … (DOE). (Poplar is a Flagship Plant.) To engineer them, researchers need to select and breed cultivars for the next … This work was supported by the NSF Dimensions of Biodiversity Program …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; [middle] … Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read … and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have … Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered … have done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in … The work (proposal: 10.46936/10.25585/60008105, WIP proposal ID: 508017, … operated under contract no. DE-AC02-05CH11231. The bioinformatics work conducted at the University of Pretoria was …
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