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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Tour the IGB
… 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to … and energy genomics.  For more information about the science depicted, click here . <span data-mce-type="bookmark" style="display: inline-block; …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying …
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JGI Announces 2026 New Investigator Portfolio
… any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … health. Proposals are accepted year-round for this ongoing call; the next deadline for proposal submission is Sept. 8, …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… York Times 2022 List of Firsts as well as other year-end science discovery lists.  Updates to the Genomic … recently created a computational pipeline that scans specifically for RNA virus sequences, initially using it to comb … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were also …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute … with. 2. Q: What would a typical turnaround time be for data once samples are in hand at JGI? A: It takes a few … at tens of microns or 100 microns, whatever you want to call it. But NanoSIMS can do that at a really fine scale, …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s … this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … They may also provide a basic understanding of the roles microbiomes play in determining the behavior of the physical …
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Igor Grigoriev
… Head at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … Igor Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about … Riley et al (2016) Comparative genomics of biotechnologically important yeasts.  Proc Natl Acad Sci U S A. …
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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2025 NeLLi Symposium
… Vegas. The poster session will be held on November 4 at the National Atomic Testing Museum at the Desert Research Institute. Metagenomic and single-cell sequence data have provided a means to access novel microbial … archaeal and microeukaryote diversity cataloged and taxonomically classified to date. Under the “sequence to function’ …
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User Support Analysis Group
… analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment …
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