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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… that infect them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of … the first time to comprehensively characterize viral-host interactions. The team discovered that the mat’s viruses … virus and host pairs in the laboratory to study their interactions. This work,  recently published in  The ISME …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… as the climate warms. However, these are complicated interactions to untangle. Fungi work in cooperation to … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …
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Crops as Tough as World Cup Turf
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UC Merced Interns Reflect on Their JGI Summer Projects
… using natural language processing techniques to categorize genetic information. Learn more about their work here in a …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… data portal Phytozome. The combination of field data and genetic information has allowed the research team to … environments, the 4X variety was more of a specialist. The genetic variation that allows the 8X variety to be a …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel … because 8X switchgrass is generally thought to harbor less genetic and phenotypic (visible traits) diversity. After our … adaptability. Using a combination of genomic, quantitative genetic, landscape, and niche modeling approaches, we …
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2022 Progress Report
… the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab …
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Six join FICUS program in 2026
… and bioproducts; hydrobiogeochemistry; interorganismal interactions; and novel applications of molecular …
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A Sorghum Pangenome Opens More Doors to Discovery
… for this plant. In other lines around the world, much more genetic diversity exists.  Now, researchers have brought … a discovery in itself, this pangenome is a tool. It shows genetic variation across sorghum varieties from a much … ever before. With this information, researchers can link genetic variation more closely with gene function and find …
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The Power of One, Amplified
… that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of friends, while another might exhibit few limitations to interactions and new connections, thus sharing more ideas, … Research Council of Canada (NSERC) Discovery Grant to PFD (2019-06265). This work was also sponsored by NSF grants …
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A One-Stop Shop for Analyzing Algal Genomes
… of algae? You now have one place where you can browse the genetic blueprints of these photosynthetic organisms. … and have potential as biofuel feedstocks. Understanding the genetic underpinnings responsible for these traits takes us … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome …
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Access to Rock Star Scientists
… : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further confirmed by …
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