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… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. … The rhizosphere is the area surrounding the roots of a plant in the soil. And I’m specifically working with a …

… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has … in STEM. Everyone is so happy to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … be the first publicly available, river-focused microbial resource that provides information at multiple scales from … can successfully partner with DOE user facilities and resources on such large-scale multi-omic data efforts, but …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … alternative fuels from plants is the high cost and resource requirements of processing these sturdy materials, … for other bioproducts.”  This is Part 2 of our three-part “Guts R Us” series. You can find Part 1 here . …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies … continents, including Antarctica where it is a major part of the flora, fire moss has adapted to conditions such as UV …

A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … the journal  Developmental Cell and provides a community resource that could help researchers track cell development …

… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten …

Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … under contract no. DE-AC02-05CH11231. This research used resources of the National Energy Research Scientific Computing … by the National Science Foundation’s XSEDE computing resource (award DEB170007), and through a Challenge Grant from …

A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently retrieve and … great strides in generating genome sequences for members of the microbial world through bulk community sequencing …

A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … and female sexes. For the first time, the sex chromosomes of shrub willow have been sequenced with sufficient …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar …

… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover just above. Described as a “river of grass” … could take on a project like this because we have the resources as a user facility. The Metagenome Program team …