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Open Frameworks Training the Next Generation of Scientists
… contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been … students developing skills in fungal biology and genomics. Fungi can be better understood through reference genomes, … no reference genomes. It’s a key problem to solve because fungi are very diverse organisms with potential …
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Tanja Woyke
… University Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. … position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the … global researchers on projects related to understanding how the interactions between viruses and their host microbes … latest strategic plan (download a copy  here ) describes how understanding these nutrient cycles can help researchers …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have … leads to photosynthetic defects, offering insights into how algal ponds can regulate photosynthesis under …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … of the groundwater were nearly cleared of contamination. By 2020, the water was at contamination levels that are below … the minimum amount of what’s allowed in drinking water. However, in the deeper sites, toxic chemicals remain.  To …
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Philympics 2021: Prophage Predictions Perplex Programs
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Pinning Down a Piece of Photosynthesis
… a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in changing … energy production, allowing cyanobacteria to quickly adapt to their environment. “The protein we studied is a … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Webinar: Introducing the BioSANS capability
… Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Biological … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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A Powerful Technique to Study Microbes, Now Easier
… collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity …
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First Monoploid Reference Sequence of Sugarcane
… “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … in part on these positive results, in 2017, JGI approved a CSP proposal from the international team to complete the …
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The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … users will enable us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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