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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … with Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … of all kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … National Laboratory (Berkeley Lab), and collaborators across Europe and Asia. CABBI partners include the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … more extreme in the field. By having transcriptomics data across 2 years, as well as a second field trial (which will …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … National Laboratory (Berkeley Lab), and collaborators across Europe and Asia. CABBI partners include the …
Learn more
iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … program generated many new high-confidence host predictions across a variety of ecosystems. In particular, it predicted …
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QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these … the right ingredients. Researchers collaborating across multiple institutions have sequenced and analyzed the …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously … planning related to the JGI’s infrastructure and business functions. He acts as a resource and provides advice and …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … metabolomic and transcriptomic survey of Populus across genotypes and environments. 2024 Nature Sci Data. 11, …
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