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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … Contract No. DE-AC02-05CH11231. Support was provided by the DOE and the National Institutes of Health, and the DFG. …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … and maize, sugarcane can grow on nutrient-poorer soils and does not need to be planted annually. The modern sugarcane …
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A Plant Root Atlas for Tracking Developmental Trajectories
… , a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … BS in Biochemistry and Cell Biology, University of California, …
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A Sorghum Pangenome Opens More Doors to Discovery
… Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work … Shakoor, a research scientist at Donald Danforth Plant Science Center.  This work is the result of an international … Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … grass that is well suited to experimental manipulation in the laboratory because of its compact genome, diploid …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have … Looking for BBTools? Find it here.  …
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A Step Toward Controlling Soybean Rust
… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… published in  The Proceedings of the National Academy of Sciences bridges this gap, by tracing the evolution of a … Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting … capabilities, technical feasibility, and relevance to the DOE’s mission.  Have someone proofread your proposal to make … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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