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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Neha Varghese
… and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and … and implementation of microservices in conjunction with the IMG platform. …
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Ben Bowen
… the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … … Achievement 2012 UC Berkeley, Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. …
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … most of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get credit for their contributions to science. A panel of DOE researchers, program managers, and …
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The Case for Conservation
… “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the … Ti’Yanna Watson: The best part about interning here is the community aspect. Everyone here has also been so very nice …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to push … the boundaries of energy and environmental genomics.” Along with Woyke, two JGI users were also elected to the AAM: …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry and Biological … Free-Living Growth and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected … are bacteria that act like tiny natural engineers with special skills to break down pollutants and recycle … they likely cooperate with other microorganisms in their community to do so.  In addition, scientists noted that the …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … symposium was to bring together a “Viral EcoGenomics” community to foster discussion on how to best capture and …
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