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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … bacterial polyphenol metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … that showcase our collaborations and capabilities to enable great science that will help solve energy and … shrubby grass that can grow year-over-year on marginal soil and with few resources. Despite the low maintenance, it …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
The  National Ecological Observatory Network (NEON) is a network of field research sites … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … of viruses that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Congratulations to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for … recognized Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and …
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You Can Move, But You Can’t Hide
… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and plasmids drive … to become an essential tool for researching global viral diversity. geNomad has already been downloaded thousands of …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … et al (2022) Wildfire-dependent changes in soil microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “The proposed research by these PIs will address a broad diversity of important scientific questions relevant to the …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The … the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … together, they found most bacterial genomes from water and soil communities were at least 80% complete when studied …
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