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… 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … underrepresented minorities in science, technology, engineering and math (STEM) fields. More than 20 UC Merced … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …

… CRAGE (Chassis-independent Recombinase-Assisted Genome Engineering) is a technique researchers can use to integrate … User Facility, is supported under contract DE-AC02- 05CH11231. …

… including the JGI portals, and our broader data ecosystem. … Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., … enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). https://doi.org/10.1038/s41579-020-0377-0 S. …

… on cone snails, C. californicus in particular, as a model system for venom-microbe interactions. Cone snail venom has … 20 UC Merced students have contributed to the research of 13 JGI scientists through the JGI-UC Merced Genomics …

… JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of … Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …

… methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important … US Department of Energy under contract no. DE-AC02-05CH11231. The Georgia Advanced Computing Resource Center (GACRC) …

… Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. Combining single cell … more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. …

… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, …

… that could be useful toward the DOE’s interest in harnessing the crop as a versatile candidate biomass … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… and whether they are within DOE mission areas of bioenergy, carbon cycling, and biogeochemistry. This is a great opportunity to … the potential to create new EcoGroups – reach out to us. 3.  Q: Can you use NCBI taxonomy information to search your … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… .  The latest article, published January 27, is about engineering plants and their microbiomes for more … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of … al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant …