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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics … annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the … of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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Publication Policy
… by the facility result in scientific publications. JGI users and collaborators have the right to produce … verification, creation of genome browsers, etc. The users, collaborators, and JGI together aim to publish the … intent of this policy and the lists we provide is to help users understand who contributed to the work, and to …
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CSP New Investigator Call
… proposals).  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the … of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … click below to schedule time with Tanja Woyke, Deputy for User Programs. Technical and Scientific Leads will also be …
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Frequently Asked Questions: Proposal Submission
… call link to see specific details including project types supported, sample/capacity limits, and instructions.  Many … institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users from certain countries (Iran, North Korea, Cuba, and …
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Natural Prodcast Episode 17: Cassandra Quave
… whether it’s for plants to make clothing, or musical instruments, or food, or medicine, which was really where my … do is really look for opportunities through grant funding programs to build up research capacity with our global … or so. But JGI, our focus as a DOE, Department of Energy, user facility is in energy and environment, and not …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and … outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata and … data ecosystem. Our community of data-downloading users spans tens of thousands of researchers. The JGI is …
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Operating Expenses
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JGI Advisory Committees Code of Conduct
… from scientists to members of the public whose tax dollars support our continuing contributions to advancing the … transparently, and ethically; Act on behalf of the JGI user community rather than personal agendas; Treat all other … of Genomic Technologies Axel Visel, Deputy for Science Programs Tanja Woyke, Deputy of User Programs …
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Partnerships: Adopt-A-Genome
… JGI products and services while nurturing a fresh cohort of users Reach the next generation of genome scientists and … Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and … Importantly, IMG/M provides data and tools via a graphical user interface, so no programming knowledge and no dedicated …
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Partners
… Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their … through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  …
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JGI Portals
… our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to … generated by the JGI and by others. The web portal allows users to navigate these genomes and conduct comparative and …
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