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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … you in support of team science and service for the good of humanity. Sincerely, The JGI Leadership Team : Nigel …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … The Impact Shrub willow and its close relative  Populus trichocarpa,  or the poplar tree, are potential biofuel …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have … metabolism is adaptation of primary metabolism. They’re duplications of the genes, and modifications that have been …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … as we discussed, they are very related. They are, you know, duplications and modifications. But one of the fun things …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … heard of the Salem Witch Trials back in the what? 15th, 16th century.  ALISON: Yeah, I lived in Massachusetts for a … some, you know, major historical events and craziness in human history.  ALISON: Yeah, that natural products could be …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned … the way. Eventually, the goal is to create an entirely human-generated yeast genome. …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … University. The CODCC aims to coordinate data acquisition, analysis, and visualization through a sustainable, … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Community Science Program
… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the user. …
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