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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 11: Marnix Medema
… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … clusters across different species, which all encode the production of either the same or similar molecules. And then … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … email once the samples are received and checked into our freezer.  Your project manager will keep you updated as your …
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Natural Prodcast Episode 16: Marcy Balunas
… and the bacteria and how the chemistry is going back and forth between them is part of what fascinates me about what … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … understanding its contribution to ecosystem function in the cellulolytic fungus-growing ant symbiosis JGI Community …
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Natural Prodcast Episode 6: Marc Chevrette
Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … in putting antibiotics together, getting them out of the cell letting them do their dirty work. So that’s one arm. … at the micro organisms on those particles, as well as like free-living you know, within the Vibrio genus. So, when I’m… …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … when I started doing a lot of this natural product production within bacteria, they're great at it, but it …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence design …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th … solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy of Genomic Technologies …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 …     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … System (LIMS) and temporary shut down of the sequencing production line to accommodate data migration requirements. …
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Natural Prodcast Episode 15: Katherine Duncan
… you buy that in the shop. And then there’s some kind of freeze-dried microalgae like spirulina that you kind of buy … both of those things have still very much done to be excellently. Dan Udwary: For sure. Kate Duncan: Not that … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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