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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! This is … well, two things. My PhD work was with a fungal pathogen called Cochliobulis heterostrophis . This is a very well …
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The JGI announces 2024 awardees for our Community Science Program annual call
From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew … selected for our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … featuring the largest collection of plasmids automatically identified from genomes, metagenomes, and … the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, metagenomes, and …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … international meeting on natural products, but as a new, I call it “incarnation”, for this series of meetings. It’s … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … framed by a positive, constructive and professional mindset, so that together we can foster a respectful, … on merit of issues; Act honestly, transparently, and ethically; Act on behalf of the JGI user community rather than …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the system. [ Go here to learn more about Cameron Currie’s metagenomics research, enabled in part by JGI’s Community … reciprocal evolution on both sides to try and outwit and outpower the other. And yeah, how that changes can be really …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into … estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … uncover these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from … they managed to enter the host cell. DGRs could prove to be powerful tools not only for viruses and other microbes , but …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … unseen — is, in fact, a microscopic water mold, genetically related to such aquatic species as diatoms and kelp. … Stokstad E. Genetics. Genomes highlight plant pathogens’ powerful arsenal . Science. 2006 Sep 1;313(5791):1217. doi: …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level … and quality control (from PacBio) 2) Review guidelines detailing quantity and quality requirements Please review the …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… to the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … Science” (FICUS) initiative .  Q: What is the difference between “regular” proposal and a consortium-type proposal? A: …
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