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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … Alliance of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Microbiome Data Science Team
… global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the next five years. It also includes more than 130 implementation milestones to help track and drive … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with … Livermore National Laboratory had teams studying Chromosome 19, which contains about 2% of the human genome. They were … chromosomes. These sequences account for approximately 12% of the total human genome, which itself was finally …
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Crysten Blaby-Haas
… She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de … and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH … for Science, 2020 NIH NRSA Postdoctoral Fellowship (F32), 2012 – 2015 Bright Futures Academic Scholarship, 2002 – 2006 …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, … sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors." Microbiology Resource …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a … Society for Industrial Microbiology and Biotechnology (2021) 2016 World Bio Markets Bio-based Business Person of the … Application US8741603 Fermentative vitamin C production. (2012) U.S. Patent Application US8318462 Fermentation process. …
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Graduate Students Get Thesis Research Opportunity at the JGI
… were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research projects …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope Carbon-13, researchers can then safely follow the path of that …
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Matt Blow
… Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  … plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria … of weakly conserved heart enhancers. Nat Genet 429:806-10. …
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