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Natural Prodcast Episode 8: Eric Schmidt
… marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Viral Genomics Group
Genomics group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host … Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions — how big (or small) can tailed … Nature Reviews Microbiology.   19 , 407 Berg, M. et al. (2021) Host population diversity as a driver of viral …
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Plant–microbiome interactions: from community assembly to plant health
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How Filamentous Fungi Sense Food
… and decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and … The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall … a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Approved Proposals
… previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations …
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JGI announces 2023 CSP Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … development enrichment activities. For some students in the 2021 cohort, this was their first internship experience, … Impact on Microbial Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… the Joint Genome Institute, because we don’t work on human health or on medicines per se, how do you see genome mining … in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass meadows' carbon … their research on the symbiotic relationship between mycorrhizal fungi and plant roots.  …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … bacteria play on mating habits of Mucoromycota fungi, and their effects on these oil-producing species. … Many fungi have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal physiology is …
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2021 Progress Report
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Natural Prodcast Episode 6: Marc Chevrette
As a host, and a little bit of my newer work is focused on plants, but in both cases, you know, these molecules are how … know, kind of antibiotics, I would think is more related to health and human health. And so JGI’s involvement kind of … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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