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… anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You … are sources of natural products, and have potential as biofuel feedstocks. Understanding the genetic underpinnings … exploring algal biology, diversity, and ecology. PhycoCosm has many components that make it useful for scientific …

The JGI leverages its existing partnerships and develops others providing complementary … the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute … and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support …

… the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing … So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …

To expand access to integrated data, improve tools and infrastructure as well as … NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome … is that microbiologists have shown that a lot of resistance has actually been due to antibiotic use in agriculture. … some great papers [on] recently – on evolution of biosynthetic gene clusters. And you and I have had some …

The JGI has a strong interest in seeing that the data produced by the facility … all those contributing significantly to the work. The JGI has significant experience and capabilities in the analysis, … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including those … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … and recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… were able to identify specific genes that allow the algae to adapt to sudden drops in salt levels, enabling it … Impact Over the last 40 years, summer sea ice in the Arctic has decreased by more than 30% in terms of quantity and … — for potential use as biomass or in biomass conversion to biofuel. Summary Water temperatures and salinity determine …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … at JGI in this area. If this series of podcast episodes has sparked your interest, and you want to learn more, then … to market, still.  ALISON: Yeah, so that was a lot of like synthetic chemistry effort to create a bunch of novel …

… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards to …

The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's …