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Natural Prodcast Episode 11: Marnix Medema
… for a while. Version 5 has been around for a bit. Version 6 is on the way, I hear? You just said. So antiSMASH is … field, many people had just been looking at like 16S taxonomic profiles of these communities looking at who is …
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Exploring Phages at JGI
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Extracting the Secrets of Secondary Metabolites
… to insects. It is carried by an infectious nematode and releases toxins into the insect’s bloodstream that quickly …
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iPHoP: A Matchmaker for Phages and their Hosts
… pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …
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JGI@25: Studying Sorghum’s Survival Skills
… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. … sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is … the JGI has deployed CRAGE to successfully domesticate some 60 strains, inserting into them a genetic sequence that acts … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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2024 Progress Report
… of Energy and Environment Meeting, which attracted 276 in-person attendees with a rich agenda across our …
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2025 NeLLi Symposium
NeLLi Symposium, join us for a 1.5-day jamboree on November 6-7 focused on improving cultivation and genomic coverage. … Dartmouth University See full agenda at the bottom of this page. … Check back for information on venue and lodging.  … …
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JGI Workshops at PAG
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Natural Prodcast Episode 6: Marc Chevrette
… metabolism.  DAN: Hi again, and welcome to Episode 6 of Natural Prodcast. What you’re going to get here is the … over time. And yeah, I mean, that was let’s see, maybe 5,6,7 years ago, and I’ve – I haven’t looked back. ALISON: So … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Microbiome Data Science Team
… of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new … dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile …
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