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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, … A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, … circle of researchers whose work aligns with the DOE’s Biological and Environmental Research program missions.  …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, the … the fungus and alga, either separately or together, on nitrocellulose filters in Petri dishes. The scientists also …
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JGI@25: From Life at the Extremes to Editing Genomes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Congratulations to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for … and around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … plants can’t run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes … JGI user/collaborator Michelle O’Malley, a chemical and biological engineer at the University of California Santa …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses … Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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JGI Announces 2026 Functional Genomics Recipients
… from scientists who translate genomic information into biological function. Through our CSP Functional Genomics … call , we look for projects that will leverage the JGI's biodesign and omics capabilities to enhance understanding of …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is …
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JGI announces 2025 Functional Genomics awardees
… Chen, Matthew Cope-Arguello, Theophilus Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron M. Roshotte; [Below] … Kathleen Scott, Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for … from scientists who translate genomic information into biological function. Through our  CSP Functional Genomics …
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