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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … David Burstein, then a postdoctoral fellow with Doudna and longtime JGI collaborator Jill Banfield, also at UC … of a new family of Cas proteins, named Cas14. Using these sequences as a starting point, JGI data …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   General attendees: $500    … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user … to explore complex biological and environmental systems using advanced experimental and informatic tools at no cost. …
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Bioenergy sorghum stem density increases threefold following internode elongation due to continued accumulation of lignified cell walls and complex regulation of genes involved in cell wall biosynthesis
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science … production, and disease resistance.  The Impact With increased lignin and iron, engineered poplar can be used to … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy …
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Complete genome sequence of Terriglobus saanensis type strain SP1PR4T, an Acidobacteria from tundra soil
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … back in 2014.  Several components of that codebase are no longer supported, and there are now much more powerful and … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The … Over the last 40 years, summer sea ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … funded by Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery program grants to C.L. Support …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy … year after year (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are increasing their yields and improving their abilities to adapt … (BER), grant nos. DE-SC0006634 and DE- SC0012379. The generation of the tetraploid M. sacchariflorus whole genome …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … While applications will be accepted that address any aspect of these mission areas, priority will be given to projects …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes advanced …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … JGI/Berkeley Lab tenure, Ray kept the 50-year-old Walnut Creek functioning at a high level as JGI transitioned from …
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