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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… best in certain regions. Most plant species have adapted to their local environments; for example, crop and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Computationally Classifying Fungal Lifestyles
… learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Open Frameworks Training the Next Generation of Scientists
… contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been … faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Team Science Reveals Important Protein in Poplar
… crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable biotechnology …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … M, Louie KB, Mueller M, et al. Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga …
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Logos and Templates
… The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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Frederik Schulz
… Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … and enrichment metagenomics for terrestrial protists. These approaches enable novel insights into the diversity and …
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