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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with … to contribute to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … in genomics, including JGI, is not representative of the diversity in the population, especially here in California. …
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Igor Grigoriev
… genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … et al (2022) Wildfire-dependent changes in soil microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. … cell wall-decomposing machinery underlies the functional diversity of forest fungi.  Science . 2011; 333: 762-765. …
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A Grass Model to Help Improve Giant Miscanthus
Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … wild Miscanthus lineages to better understand the genetic diversity of the grass, which could help in optimizing …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … large metabolite databases by running 1000s of metabolite standards, and development of high-throughput untargeted …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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