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JGI Launches Latest Strategic Plan
… data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of … role in a Microbiome Data Science effort (pages 37-39) and the launching of a Secondary Metabolites research group (pages 47-49). “Our hope is to circulate this document widely within …
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iPHoP: A Matchmaker for Phages and their Hosts
… than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is … It combines and evaluates multiple predictions to reliably match viruses with their archaea and bacteria hosts. The … Summary Existing programs use a variety of approaches to match a virus with a potential host. This can result in …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… will help solve energy and environmental challenges. In 2009, researchers at the JGI and the Bigelow Laboratory for … a novel technique to access high-quality genomic information using minute quantities of DNA derived from …
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Igor Grigoriev
… diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which … deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in … revealed by comparative genomics.  Nature Microbio 2:17087. Mondo et al (2017)  Widespread adenine N6-methylation …
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JGI-UC Merced Interns Share Their 2021 Experiences
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Fishing for Novel Cellulose Degraders
… and Environmental Research under contract DE-FC02-07ER64494. EG is supported by the NIGMS Biotechnology Training Program (NIH 5 T32 GM008349) at the University of Wisconsin – Madison. This work was …
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JGI announces 2024 Functional Genomics awardees
… research from reseachers who translate genomic information into biological function. Through our CSP Functional … atmospheric carbon sequestration into sustainable biomaterials, and developing high-throughput methods to reveal … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline is …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… minorities in science, technology, engineering and math (STEM) fields. More than 20 UC Merced students have … Banuelos (2017 graduate intern): Assistant Professor of Mathematics at California State University, Fresno (Fall 2018) …
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Enlarging Windows into Understanding Gene Functions
… species to answer questions about how they break down plant materials, which could be useful for industrial biofuel … development. “DAP-Seq is the main source of information in the project,” Nagy added. “Since the FUNCODE is … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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You Can Move, But You Can’t Hide
… Office of Biological and Environmental Research (BER) (89233218CNA000001 to L.A.N.L., DE-AC05-00OR22725 to O.R.N.L., … (BER) under contract numbers DE-AC02-05CH11231 (LBNL), 89233218CNA000001 (LANL), and DE-AC05-76RL01830 (PNNL). …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of …
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Building Wet and Dry Lab Skills
… in the lab, they were either exploring Berkeley and acclimating to the weather or practicing soccer with local Bay … comfortable with. We collected seeds. We also use CRISPR-Cas9. And right now we have over 300 plants that we’re trying …
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