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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … sprung up in almost all branches of eukaryotes (organisms with a nucleus). In part because of this evolutionary …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for … strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, developed by …
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DOE Metrics
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JGI on the 2020 Highly Cited Researchers List
… Salamov were part of a JGI-led team that  applied machine learning to classify 101 representative genomes of …
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JGI@25: Solving the Mystery of the Missing Oil
… that will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that dumped nearly five … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …
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Leo Baumgart
… Lin Yang, Cindy Chen et al. "Recruitment, rewiring and deep conservation in flowering plant gene regulation." … Sanchez-Perez, Ben Scheres, and Viola Willemsen. "Two deeply conserved non-coding sequences control PLETHORA1/2 … Player-Jackson et al. "Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)." In 2025 IEEE …
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Matt Blow
… Free-Living Growth and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less salt — near the surface where algae grow. Armed with a better understanding of the alga’s stress resistance … range of habitats — from brine pockets and melt pools, and within the water column. They are also the primary producers …
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Simon Roux
… approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. The ISME Journal … Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. …
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Forming Scientific Connections and Building Community
… had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Being an intern here has allowed me to make connections with the top of the top scientists in their fields. I have … great meeting the wonderful people who work at JGI and learning about their research.” Mentor: Juan C. Villada …
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Silver age of GOLD introduces new features
… the appropriate contextual information, or metadata, stored with them. GOLD provides manually curated metadata resources … publication. Information is also obtained and cross-checked with public resources including NCBI Taxonomy and various … is available — enabling metadata-driven scientific discoveries. GOLD’s  public Application Programming …
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