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Phyllosticta paracitricarpa is synonymous with the EU quarantine fungus P. citricarpa based on phylogenomic analyses
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … soil health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one …
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Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better understand their …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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Microbial community analysis of three hydrocarbon reservoir cores provides valuable insights for the assessment of reservoir souring potential
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … right? So I spent a lot of effort, like building my code base, running jobs that take like two days to, like, go …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … generating their  genome sequences to improve breeding by genetic improvements. Apomixis is asexual reproduction … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) …
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