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Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly
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Arabidopsis Root Microbiome Microfluidic (ARMM) Device for Imaging Bacterial Colonization and Morphogenesis of Arabidopsis Roots
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Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … how such inter-Facility collaborations through the Genomes to Structure and Function focus area of the JGI’s … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using dwindling … restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … soil management practices. Read the full release from Anuvia  here .     …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … resides in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  which dwells … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett … This research was supported by the National Science Foundation (NSF) …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … the data and work with the data. Q: How would you include a reference or citation in a proposal? A: If you’re presenting …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … the 1000 Fungal Genomes Project, which aims to provide a reference genome for each of the fungal families. …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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One Complete and Seven Draft Genome Sequences of Subdivision 1 and 3 Acidobacteria Isolated from Soil
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