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… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … used to define a minimum tiling path of sequences in a single contiguous region. The JGI sequenced half of the …

… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …

… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … more genomes from complex metagenomes than any of the single binning tools alone,” primarily because of its … Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …

… to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant … published in 2014 by a team led by University of Pretoria scientists with help from researchers at the DOE Joint …

… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… citrus, trifoliate orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now … a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… Scientists have discovered that the candidate bioenergy … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic …

… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …

… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …

… Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve Singer are … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …

… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass spectrometry …