Results

The Mobilome in the Mire
… Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time series …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … edited and condensed below.   Sarah Sharman:  What is the JGI Plant Gene Atlas? Avinash Sreedasyam:  JGI Plant Gene …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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A One-Stop Shop for Analyzing Algal Genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, … than 100 sequenced algal genomes — many sequenced by the JGI — so researchers can easily explore the evolutionary and …
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Team Science Reveals Important Protein in Poplar
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator program , … Foundry and the Joint BioEnergy Institute (JBEI.) The JGI team measured the levels of gene expression in the …
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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific … Selected Publications …
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single … team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or a microbe with a DGR, …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … own perspectives. The interns from this cohort and their JGI mentors are listed below, along with their project focus … is Dr. Jonelle Basso. Shayna Bennett : So while here at the JGI, I’ve been studying mobile genetic elements and CRISPR …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, was … and network with talented scientists and staff at the JGI.” Listed below are the interns, their mentors, and their …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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