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… with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … a billion years of evolution offers catalogs of enzymes, secondary metabolites, and other parts lists for … fungal genomics, and is already being used as a training ground for the next generation of scientists. Initiatives …

… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … of 328 “high quality” (based on completeness) diverse new virophage genomes containing all four core genes. These …

… (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … can whip up dozens of complex natural products, including new ones. The Impact In the past, natural products have been … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … to protect themselves from environmental stresses, ferns’ secondary metabolites and associated genes are great … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …

… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as …

…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid … capability for Auxenochlorella means engineers can produce new bioproducts in a more predictable and reliable manner. …