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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace … internships in Walnut Creek. The students’ research culminated in presentations on their work delivered during the 5th …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. … we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global … research community in studies of complex biological and environmental systems. We optimize our service to the …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The … they are addressing the world’s most pressing energy and environmental challenges.  The invited talks emphasize how …
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A Sorghum Pangenome Opens More Doors to Discovery
… for breeders and researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, … Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work … work contributes to the efforts of the DOE Biological and Environmental Research (BER) program to apply systems …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … struggle to identify and classify new species from environmental samples. Meanwhile, even well-studied genomes …
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Len Pennacchio
… DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … biology. He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … served as the Functional Genomics Department Head for the Environmental Genomics and Systems Biology Division of the …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental processes. The Science In a recent Microbiome … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE … JGI and KBase are both supported by the DOE Biological and Environmental Research program.  KBase is a knowledge …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … into the resources and capabilities of both the JGI and the Environmental Molecular Science Laboratory (EMSL) at Pacific …
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An Automated Tool for Assessing Virus Data Quality
… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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