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… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … more than 10,000 inovirus-like sequences compared to the 56 previously known inovirus genomes. “These genomes are so …

… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … all that it has contributed, and what they’re excited about in JGI’s future. Find recordings and recaps of these … to be junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many …

… Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and … research following the discovery of bacteria 5,000 times the average size. Woyke’s  Single Cells Group … sped up the study of giant viruses.  Kyrpides and the JGI’s IMG/M Data Portal were instrumental to  a study that looked …

… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … microbe-microbe and plant-microbe interactions in various environments to improve crop yield, and developing a …

… The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … (CAMI) Challenge, a competition launched in 2015 by a community initiative, with varying numbers of genomes … and soil from the Angelo Coast Range Reserve in California. Using DAS Tool on data from soil samples, researchers were …

… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … chemical production. The Science Soil bacteria in the genus Streptomyces are nature's chemical factories. They hold … , scientists found that adding salt to the growth medium caused Streptomyces coelicolor to activate multiple chemical …

… the dry rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the … towards breaking down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study … to thrive in manmade environments. As reported January 5, 2018 in The ISME Journal , a team led by University of …

… bacterial interactions with animals and plants, or cause metal corrosion in oil pipes. Scientists have tried to … require external illumination, making them difficult to use inside deep tissues. Additionally, all plants, many … need external illumination to produce a signal, making them useful in a wider range of environments. This new technology …

… (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular … technology that enables researchers to generating thousands to millions of copies of a particular DNA sequence … JGI’s help. Additionally, the Marsarchaeota comprise 20-50 percent of the iron-oxide microbial mat communities in …

… Miscanthus  sequence offers insights into benefits of polyploidy and … and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome … insights into how the multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights …

… participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, training 316 … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the …

… difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to … a single contiguous region. The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to …