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Analysis of the complete mitochondrial genome sequences of the soybean rust pathogens Phakopsora pachyrhizi and P. meibomiae
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Complete Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. mobilis Centrotype ATCC 29191
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Complete Genome Sequence of the Photosynthetic Purple Nonsulfur Bacterium Rhodobacter capsulatus SB 1003▿
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. … modeling, simulation and coarse-graining of biological complexity with NFsim. Nature Methods 8, 177–183 (2011).  …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … multi-investigator effort was to decode the complex Phytophthora ramorum genome. The JGI generated the …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … This research project was supported by a grant from Santa Barbara …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in … supports various CSP and FICUS user projects for the Metagenome Program. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and … order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final six …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an … (MCR), the final step in methanogenesis, or MCR-like complexes, likely involved in short-chain alkane oxidation. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … JGI Staff: Upon request, JGI staff will provide Users with a list …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  …
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