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Polar Phytoplankton Need Zinc to Cope with the Cold
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this … the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … Challenge, a competition launched in 2015 by a community initiative, with varying numbers of genomes to demonstrate …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … hot springs, an extreme environment with low genetic diversity that would help narrow down potential sources of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … work on four strategic themes: Nutrient Cycling, Functional Diversity, Data and Connectivity and Stewarding Resources. … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA …
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Partners
… The JGI leverages its existing partnerships and develops others … advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha … and RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked …
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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A One-Stop Shop for Analyzing Algal Genomes
… with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, …
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Genome Insider
… Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles … analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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