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Crysten Blaby-Haas
… University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein National Research Service Award (NRSA) Individual Postdoctoral …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental processes. The Science In a recent Microbiome paper … the analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . …
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Data Policy & Support
… Read our research integrity and data code of conduct. … JGI Scientist Code of Conduct … Additional Resources  …
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Taking Stock of the Known and Unknown Microbial Space
… sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality … Explorations for Understanding the Microbial World Corresponding author Ivanova said that the JGI continues to …
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Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … algae. But human-induced climate change , a new study suggests, is displacing these important cold-water … of East Anglia (UEA, UK) and senior author of the study. “Prokaryotes are not capable of producing all the …
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Team Science Reveals Important Protein in Poplar
… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … within poplar involved in plant growth, lignin production, and disease resistance.  The Impact With increased … x-ray bioimaging experiments were conducted to study iron accumulation and cell wall structure in the …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and … the dice. There’s some evidence to support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics …
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The Impact of Genome Analyses on Our Understanding of Ammonia-Oxidizing Bacteria*
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Microbiome Data Science: Understanding Our Microbial Planet
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the plant’s genome … a longtime JGI collaborator and a senior author on this study. The use of switchgrass as a feedstock for …
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … Finally, using transcriptomics, researchers were able to study which of the trees were turned on or off in response … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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