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… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …

… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities … through a collaborative, peer-reviewed proposal process—enabling researchers worldwide to explore complex … Click to view a downloadable copy of the sponsor prospectus …

… campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … be held on Nov. 18 in the Tilden room and open-air patio of the same building.  The symposium will include a mix of …

… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … and thus be used as templates to correct mutations. This process, called gene conversion, helps maintain the … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …

… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … interactions? Do generalist viruses run rampant, capable of infecting different host species? Or, do they tend to … replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses are also …

… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) … statistical analyses to continuously refine and improve the process. The results yielded several CRISPR-Cas systems, and …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link viruses to their … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades of …

… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …

… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to develop … Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 Friday …

… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … Berkeley National Laboratory, the HudsonAlpha Institute for Biotechnology, and Duke University, published their research … computer program would best serve their quests related to processing RNA-sequencing information. According to …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team … . Zoospores were then collected by centrifugation. This process was repeated multiple times in order to obtain … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum … Faculty Investigator at the HudsonAlpha Institute for Biotechnology Genome Sequencing Center and a member of the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …