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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key … aquatic environments. The Impact A deeper understanding of how plants adapted to terrestrial life paves the way for …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … Atlas and PPRD could help with understanding gene functional roles, but the experimental inconsistency makes … funding grants aimed specifically at “Gene function” and “Functional genomics.” We will keep updating the Gene Atlas …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in … call, as well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … their new biosensor for cyclic di-GMP. The team created functional biosensors by finding an insertion site for the … homologous YcgR proteins and chose a set of 92 proteins for functional characterization as candidate biosensors. These …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome … five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … natural forests and plantations managed through human intervention. By leveraging metagenomics, scientists …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … community and consider new initiatives in areas such as functional studies (e.g., a functional encyclopedia building on GEBA) and in microbiome …
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Cultivating Symbiotic Antarctic Microbes
… The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … environments, water and air-atmosphere with the humans and the biosphere), including the global carbon … probes. Co-fluorescence suggested the Nha-C cells were interacting with another abundant species in the enrichment …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common … The planet’s resources are being stretched by a growing human population and increasing demand for agricultural …
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The fungus that made itself at home
… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint … because its local environment has been less impacted by human encroachment. The team also did head-to-head, or …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP … efforts including systems-based approaches to unravel functional capabilities of plants, microbes and microbial …
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Ben Bowen
… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …
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