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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes … resides in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  which dwells … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … her research focused on stable and accurate computational methods for reacting subsurface flows, and evolved into … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … as Director of Scientific Computing at Predicine, an NGS-based clinical cancer diagnostics company, where he led the …
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A toolkit for microbial community editing
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Microbial adaptability in changing environments
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … hold the potential to accelerate development of bio-based manufacturing processes for producing industrial … The team also identified previously unknown promoter sequences within these gene clusters, offering new …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Linking lignin engineering to drought stress resilience: RNA-seq and … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures …
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Sequencing the fungal tree of life
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Genome sequence of the palaeopolyploid soybean
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ClaMS: A Classifier for Metagenomic Sequences
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … over 27,000 microbial genes. These genes were identified based on their potential to efficiently degrade … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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