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… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not … working to address some of the most pressing challenges of our time. For more information, please visit  …

… July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …

… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of … tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? A(nswer): If you … project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for …

… Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … method can be  accessed here so that, Session said, other scientists can “follow a step-by-step process to apply it to … genes from all possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on …

… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … used to define a minimum tiling path of sequences in a single contiguous region. The JGI sequenced half of the …

… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …

… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … more genomes from complex metagenomes than any of the single binning tools alone,” primarily because of its … Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under Contract No. …

… to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant … published in 2014 by a team led by University of Pretoria scientists with help from researchers at the DOE Joint …

… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… citrus, trifoliate orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now … a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… Scientists have discovered that the candidate bioenergy … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic …