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… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of … breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical …

… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … such fluctuations. P. psychrophila is a species of Pelagophyceae, a microalga shown to thrive in both nutrient-rich … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant …

… products at volumetric productivities greater than the source strains. (Blake Rasor) Think of cells as tiny … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …

… bioeconomy, including, potentially, methane as an energy source.  Until recently, our understanding of these … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety …

… analysis capability available through the  Community Science Program (CSP) . This includes mass … anywhere around the world can apply to access the JGI’s resources. Q:  Where can I get information for funding by JGI? … on a peer-reviewed competitive basis via its  User Programs . Q:  Are applicants outside of JGI eligible to …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …

… and thousands of resequenced sorghum varieties, a resource for breeders and researchers to harness the traits … Shakoor, a research scientist at Donald Danforth Plant Science Center.  This work is the result of an international … building the data sets that are needed to build the algorithms of the future. With more understanding of how these …

… viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. …

… internship experiences have influenced their careers in science. Hear more about what they learned from working with … their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk Eric Wu and mentor Atif Shahab Edward Lu and … the same problem. We can research on the internet and share our findings. And that was really important for me.  Tyrome …

… here , here and here ), and the data has been used to better understand arsenic mobility and to better … sulfur cycle. Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …

… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … company that went public and was later acquired by Ginkgo Bioworks. Earlier in his career, he was a core software …