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Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil
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Charting Progress toward Professional Goals
… programs – some managed by the Lab – to learn more about their experiences. Jehan Jacobs participated in the … it? Jehan Jacobs : I have a poster session actually, like just a couple days from now. So I've been thinking about … phylogeny to people who have been working here for like decades?” So, just important to like, kind of tailor what …
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Improving the Cacao Genome and Phytozome
… Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research (BER) and is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in …
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Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean
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Omics analyses and biochemical study of Phlebiopsis gigantea elucidate its degradation strategy of wood extractives
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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Comparative Genomic Analyses of Cellulolytic Machinery Reveal Two Nutritional Strategies of Marine Labyrinthulomycetes Protists
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Evolution of a Fungal Gene Expression Regulator
… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … the “dark” functional realm. Their focus sharpened on deciphering the intricate world of protein functional … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Academy of Sciences , a team of researchers has found numerous examples of polycistronic expression – in which two or … looked like mistakes by the gene prediction algorithms. I decided to dig in a little deeper, and realized what was … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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