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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and … Partners to host students transitioning from high school to community college. … University of California, Merced … …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … and professional expertise to support the global research community in studies of complex biological and environmental … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a continuation of the previous … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … from the US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population …
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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford … the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 …
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Targeted single‐cell sequencing
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Introduction: Sequences and consequences
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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