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… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … by the JGI. Transmission electron microscopy (TEM) provided high resolution images confirming the  Hrr. lacusprofundi  …

… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … Research (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his … and scaled the multiDAP-seq assay, a method that enables high-throughput characterization of transcription factor binding … BS in Biochemistry and Cell Biology, University of California, …

… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo …

… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … the University of California, Davis proposes to develop high quality reference genomes for 10 individuals from each …

… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … explained. “Not only do you not know in which direction the enzyme these genes encode are used — so producing methane or …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …

… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced … Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … the Lab’s Computational Research Division and head of the High Performance Computing Research Department. “It’s …

… the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …

… In April 2020, we mark both the 50th celebration of Earth … As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th …

… Collaboratory encourages user engagement. The Science In addition to the core set of "primary … compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …

… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals … make use of JGI’s breadth of capabilities while also highlighting collaborative research of a scale exceeding a …