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User Executive Committee Charter
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR …
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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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UC Merced Interns Reflect on Their JGI Summer Projects
… develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … students worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to categorize …
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Comparative transcriptomics of CAZy enzymes in white- and brown-rot agaricomycetes: Evolutionary insights into lignocellulose degradation and the relevance of GH16 glycoside hydrolase functional divergence
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A Community Resource for Secondary Metabolite Researchers
… Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular … Handling Editor, Journal Experimental Botany, 2022 – present … Scholarship, 2002 & 2004 Graduate Student Award, 59th Lindau Meeting of Nobel Laureates and Students in Lindau, …
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From Textbook to Real World Applications
… and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from … call, as well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … they found that microbial community composition and functional potential varied across tree species and sites, … It also provides further insight into the ecology and functional potential of the phyllosphere, extending beyond …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the JGI provided DNA synthesis capabilities to enable functional testing of these enzymes. Yasuo Yoshikuni, head … during specializing or multiplying, ATs have maintained functional versatility with fewer enzyme copies. In this …
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