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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … is desirable in the microbiome field due to its high recovery of single-cell genomes. This is key to better … sequencing. Shotgun metagenomic sequencing takes much less time than its single-cell counterpart. In this approach, DNA …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Jane Grimwood Named HudsonAlpha Genomics Chair
Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing the economy of Rocket City. Grimwood is also co-director of the … related to seed dispersal in wild populations for the first time. A 2020 Nature Genetics paper describing the genomes of …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … uncharted branches of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and cultivated …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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Introducing New Members of the JGI User Executive Committee
JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … genetic engineering technique CRAGE lands the cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) … doubling the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI … by desire to pursue a STEM career, specifically in a government lab. My favorite thing is the mentorship provided … It’s fun to be around people who are generous with their time and like nerding out about the big stuff, well, the …
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in … Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy …
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for … the JGI, responsible for the data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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